IL_6RI5_010

3D structure

PDB id

6RI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUGGGG*UUCUUUGUAA

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RI5|1|A|U|168
6RI5|1|A|U|169
6RI5|1|A|G|170
6RI5|1|A|G|171
6RI5|1|A|G|172
6RI5|1|A|G|173
*
6RI5|1|A|U|245
6RI5|1|A|U|246
6RI5|1|A|C|247
6RI5|1|A|U|248
6RI5|1|A|U|249
6RI5|1|A|U|250
6RI5|1|A|G|251
6RI5|1|A|U|252
6RI5|1|A|A|253
6RI5|1|A|A|254

Current chains

Chain A

25S RNA

Nearby chains

Chain H

60S ribosomal protein L8-A

Chain K

60S ribosomal protein L13-A

Chain Z

60S ribosomal protein L35-A