IL_6RI5_036

3D structure

PDB id

6RI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGUAUCA*UGAAG

Length

12 nucleotides

Bulged bases

6RI5|1|A|A|1103

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RI5|1|A|C|977
6RI5|1|A|G|978
6RI5|1|A|U|979
6RI5|1|A|A|980
6RI5|1|A|U|981
6RI5|1|A|C|982
6RI5|1|A|A|983
*
6RI5|1|A|U|1100
6RI5|1|A|G|1101
6RI5|1|A|A|1102
6RI5|1|A|A|1103
6RI5|1|A|G|1104

Current chains

Chain A

25S RNA

Nearby chains

Chain Q

60S ribosomal protein L18-A

Chain T

60S ribosomal protein L21-A

Chain a

60S ribosomal protein L29

Chain b

60S ribosomal protein L7-A