IL_6RI5_096

3D structure

PDB id

6RI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGGAG*CGCCAGUGAAAUAC

Length

19 nucleotides

Bulged bases

6RI5|1|A|C|2479

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RI5|1|A|G|2465
6RI5|1|A|G|2466
6RI5|1|A|G|2467
6RI5|1|A|A|2468
6RI5|1|A|G|2469
*
6RI5|1|A|C|2476
6RI5|1|A|G|2477
6RI5|1|A|C|2478
6RI5|1|A|C|2479
6RI5|1|A|A|2480
6RI5|1|A|G|2481
6RI5|1|A|U|2482
6RI5|1|A|G|2483
6RI5|1|A|A|2484
6RI5|1|A|A|2485
6RI5|1|A|A|2486
6RI5|1|A|U|2487
6RI5|1|A|A|2488
6RI5|1|A|C|2489

Current chains

Chain A

25S RNA

Nearby chains

Chain p

uL1

Chain w

60S ribosomal export protein NMD3