IL_6RI5_157
3D structure
- PDB id
- 6RI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CGUAUC*GAAG
- Length
- 10 nucleotides
- Bulged bases
- 6RI5|1|A|A|1103
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6RI5_157 not in the Motif Atlas
- Homologous match to IL_8CRE_039
- Geometric discrepancy: 0.5044
- The information below is about IL_8CRE_039
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_34737.1
- Basepair signature
- cWW-L-cHW-L-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
6RI5|1|A|C|977
6RI5|1|A|G|978
6RI5|1|A|U|979
6RI5|1|A|A|980
6RI5|1|A|U|981
6RI5|1|A|C|982
*
6RI5|1|A|G|1101
6RI5|1|A|A|1102
6RI5|1|A|A|1103
6RI5|1|A|G|1104
Current chains
- Chain A
- 25S RNA
Nearby chains
- Chain Q
- 60S ribosomal protein L18-A
- Chain a
- 60S ribosomal protein L29
- Chain b
- 60S ribosomal protein L7-A
Coloring options: