IL_6RIE_003

3D structure

PDB id

6RIE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Vaccinia Virus DNA-dependent RNA polymerase co-transcriptional capping complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CT*AG

Length

4 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RIE|1|N|DC|28
6RIE|1|N|DT|29
*
6RIE|1|T|DA|17
6RIE|1|T|DG|18

Current chains

Chain N

Non-template DNA strand

Chain T

Template strand DNA

Nearby chains

Chain A

DNA-dependent RNA polymerase subunit rpo147

Chain B

DNA-dependent RNA polymerase subunit rpo132

Chain S

DNA-directed RNA polymerase 30 kDa polypeptide