IL_6RM3_009

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AU*AGUUGU

Length

8 nucleotides

Bulged bases

6RM3|1|L50|U|217

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6RM3_009 not in the Motif Atlas

Geometric match to IL_4V9F_009

Geometric discrepancy: 0.2372

The information below is about IL_4V9F_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_10396.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

6

Unit IDs

6RM3|1|L50|A|202
6RM3|1|L50|U|203
*
6RM3|1|L50|A|214
6RM3|1|L50|G|215
6RM3|1|L50|U|216
6RM3|1|L50|U|217
6RM3|1|L50|G|218
6RM3|1|L50|U|219

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LG0

eL8

Chain LN0

eL15