IL_6RM3_017

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CA*UAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6RM3_017 not in the Motif Atlas

Homologous match to IL_8C3A_038

Geometric discrepancy: 0.1799

The information below is about IL_8C3A_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05035.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

38

Unit IDs

6RM3|1|L50|C|695
6RM3|1|L50|A|696
*
6RM3|1|L50|U|813
6RM3|1|L50|A|814
6RM3|1|L50|G|815

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LAA

uL15

Chain LBB

eL29

Chain LL0

eL13

Chain LQ0

eL18

Chain LT0

eL21