IL_6RM3_020
3D structure
- PDB id
- 6RM3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AUGUAG*UUAAUU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6RM3_020 not in the Motif Atlas
- Geometric match to IL_7A0S_027
- Geometric discrepancy: 0.1803
- The information below is about IL_7A0S_027
- Detailed Annotation
- 5x5 Sarcin-Ricin with intercalated A; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_81631.1
- Basepair signature
- cWW-L-R-cSH-R-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
6RM3|1|L50|A|719
6RM3|1|L50|U|720
6RM3|1|L50|G|721
6RM3|1|L50|U|722
6RM3|1|L50|A|723
6RM3|1|L50|G|724
*
6RM3|1|L50|U|759
6RM3|1|L50|U|760
6RM3|1|L50|A|761
6RM3|1|L50|A|762
6RM3|1|L50|U|763
6RM3|1|L50|U|764
Current chains
- Chain L50
- 23S rRNA
Nearby chains
- Chain L70
- 5S ribosomal RNA; 5S rRNA
- Chain LF0
- uL30
- Chain LI0
- uL16
- Chain LT0
- eL21
Coloring options: