IL_6RM3_044

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUG*CGAG

Length

7 nucleotides

Bulged bases

6RM3|1|L50|A|1683

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6RM3_044 not in the Motif Atlas

Geometric match to IL_4V9K_064

Geometric discrepancy: 0.2586

The information below is about IL_4V9K_064

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.4

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

215

Unit IDs

6RM3|1|L50|C|1511
6RM3|1|L50|U|1512
6RM3|1|L50|G|1513
*
6RM3|1|L50|C|1681
6RM3|1|L50|G|1682
6RM3|1|L50|A|1683
6RM3|1|L50|G|1684

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LPP

eL43