IL_6RM3_051

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUU*AC

Length

5 nucleotides

Bulged bases

6RM3|1|L50|U|1771

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6RM3_051 not in the Motif Atlas

Homologous match to IL_8C3A_098

Geometric discrepancy: 0.1326

The information below is about IL_8C3A_098

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.19

Basepair signature

cWW-L-cWW

Number of instances in this motif group

123

Unit IDs

6RM3|1|L50|G|1770
6RM3|1|L50|U|1771
6RM3|1|L50|U|1772
*
6RM3|1|L50|A|2080
6RM3|1|L50|C|2081

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LC0

uL4

Chain LNN

MDF2