IL_6RM3_053

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UAG*UGGG

Length

7 nucleotides

Bulged bases

6RM3|1|L50|G|1881

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6RM3_053 not in the Motif Atlas

Homologous match to IL_8C3A_100

Geometric discrepancy: 0.1357

The information below is about IL_8C3A_100

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38958.10

Basepair signature

cWW-cWW-cWW-tHS

Number of instances in this motif group

9

Unit IDs

6RM3|1|L50|U|1784
6RM3|1|L50|A|1785
6RM3|1|L50|G|1786
*
6RM3|1|L50|U|1879
6RM3|1|L50|G|1880
6RM3|1|L50|G|1881
6RM3|1|L50|G|1882

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LA0

uL2

Chain LN0

eL15

Chain LOO

eL42