IL_6RM3_058

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUA*UA

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6RM3_058 not in the Motif Atlas

Geometric match to IL_7A0S_054

Geometric discrepancy: 0.1533

The information below is about IL_7A0S_054

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_15011.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

48

Unit IDs

6RM3|1|L50|U|2043
6RM3|1|L50|U|2044
6RM3|1|L50|A|2045
*
6RM3|1|L50|U|2057
6RM3|1|L50|A|2058

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LAA

uL15

Chain LOO

eL42

Chain LQ0

eL18