IL_6RM3_151
3D structure
- PDB id
- 6RM3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UGAGUAC*GAAAAG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6RM3_151 not in the Motif Atlas
- Homologous match to IL_4V9F_106
- Geometric discrepancy: 0.2176
- The information below is about IL_4V9F_106
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_02666.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
6RM3|1|L70|U|72
6RM3|1|L70|G|73
6RM3|1|L70|A|74
6RM3|1|L70|G|75
6RM3|1|L70|U|76
6RM3|1|L70|A|77
6RM3|1|L70|C|78
*
6RM3|1|L70|G|98
6RM3|1|L70|A|99
6RM3|1|L70|A|100
6RM3|1|L70|A|101
6RM3|1|L70|A|102
6RM3|1|L70|G|103
Current chains
- Chain L70
- 5S rRNA
Nearby chains
- Chain L50
- Large subunit ribosomal RNA; LSU rRNA
- Chain LF0
- uL30
- Chain LI0
- uL16
- Chain LS0
- eL20
Coloring options: