IL_6RW4_027

3D structure

PDB id

6RW4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF3

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GGU*GC

Length

5 nucleotides

Bulged bases

6RW4|1|A|G|1179

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6RW4_027 not in the Motif Atlas

Homologous match to IL_6CZR_148

Geometric discrepancy: 0.4199

The information below is about IL_6CZR_148

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.12

Basepair signature

cWW-L-cWW

Number of instances in this motif group

52

Unit IDs

6RW4|1|A|G|1178
6RW4|1|A|G|1179
6RW4|1|A|U|1180
*
6RW4|1|A|G|1474
6RW4|1|A|C|1475

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 2

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1