IL_6RW4_049

3D structure

PDB id

6RW4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF3

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

AUCACCCCCUCCCCAAU*AACAUAU

Length

24 nucleotides

Bulged bases

6RW4|1|A|C|954, 6RW4|1|A|C|959, 6RW4|1|A|C|960, 6RW4|1|A|U|961, 6RW4|1|A|A|966, 6RW4|1|A|A|1041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RW4|1|A|A|952
6RW4|1|A|U|953
6RW4|1|A|C|954
6RW4|1|A|A|955
6RW4|1|A|C|956
6RW4|1|A|C|957
6RW4|1|A|C|958
6RW4|1|A|C|959
6RW4|1|A|C|960
6RW4|1|A|U|961
6RW4|1|A|C|962
6RW4|1|A|C|963
6RW4|1|A|C|964
6RW4|1|A|C|965
6RW4|1|A|A|966
6RW4|1|A|A|967
6RW4|1|A|U|968
*
6RW4|1|A|A|1036
6RW4|1|A|A|1037
6RW4|1|A|C|1038
6RW4|1|A|A|1039
6RW4|1|A|U|1040
6RW4|1|A|A|1041
6RW4|1|A|U|1042

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 2

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Chain E

28S ribosomal protein S6, mitochondrial

Chain J

28S ribosomal protein S12, mitochondrial

Chain L

28S ribosomal protein S15, mitochondrial

Chain N

28S ribosomal protein S17, mitochondrial

Chain P

28S ribosomal protein S18c, mitochondrial

Chain T

28S ribosomal protein S25, mitochondrial

Chain U

28S ribosomal protein S26, mitochondrial