3D structure

PDB id
6RW5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3
Experimental method
ELECTRON MICROSCOPY
Resolution
3.14 Å

Loop

Sequence
UGGUCAAUUU*AUUA
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6RW5|1|A|U|876
6RW5|1|A|G|877
6RW5|1|A|G|878
6RW5|1|A|U|879
6RW5|1|A|C|880
6RW5|1|A|A|881
6RW5|1|A|A|882
6RW5|1|A|U|883
6RW5|1|A|U|884
6RW5|1|A|U|885
*
6RW5|1|A|A|910
6RW5|1|A|U|911
6RW5|1|A|U|912
6RW5|1|A|A|913

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain 7
Translation initiation factor IF-2, mitochondrial
Chain D
28S ribosomal protein S5, mitochondrial
Chain G
28S ribosomal protein S9, mitochondrial
Chain J
28S ribosomal protein S12, mitochondrial
Chain O
28S ribosomal protein S18b, mitochondrial
Chain Z
28S ribosomal protein S33, mitochondrial

Coloring options:

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