IL_6RW5_023

3D structure

PDB id

6RW5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.14 Å

Loop

Sequence

AAACU*ACUAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6RW5_023 not in the Motif Atlas

Homologous match to IL_4LFB_033

Geometric discrepancy: 0.1566

The information below is about IL_4LFB_033

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_05821.1

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

17

Unit IDs

6RW5|1|A|A|1067
6RW5|1|A|A|1068
6RW5|1|A|A|1069
6RW5|1|A|C|1070
6RW5|1|A|U|1071
*
6RW5|1|A|A|1087
6RW5|1|A|C|1088
6RW5|1|A|U|1089
6RW5|1|A|A|1090
6RW5|1|A|U|1091

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain I

28S ribosomal protein S11, mitochondrial

Chain Q

28S ribosomal protein S21, mitochondrial