IL_6RW5_048

3D structure

PDB id

6RW5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.14 Å

Loop

Sequence

AUCACCCCCUCCCCAAU*AACAUAU

Length

24 nucleotides

Bulged bases

6RW5|1|A|C|954, 6RW5|1|A|C|959, 6RW5|1|A|C|960, 6RW5|1|A|U|961, 6RW5|1|A|A|966, 6RW5|1|A|A|1041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RW5|1|A|A|952
6RW5|1|A|U|953
6RW5|1|A|C|954
6RW5|1|A|A|955
6RW5|1|A|C|956
6RW5|1|A|C|957
6RW5|1|A|C|958
6RW5|1|A|C|959
6RW5|1|A|C|960
6RW5|1|A|U|961
6RW5|1|A|C|962
6RW5|1|A|C|963
6RW5|1|A|C|964
6RW5|1|A|C|965
6RW5|1|A|A|966
6RW5|1|A|A|967
6RW5|1|A|U|968
*
6RW5|1|A|A|1036
6RW5|1|A|A|1037
6RW5|1|A|C|1038
6RW5|1|A|A|1039
6RW5|1|A|U|1040
6RW5|1|A|A|1041
6RW5|1|A|U|1042

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 2

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Chain E

28S ribosomal protein S6, mitochondrial

Chain J

28S ribosomal protein S12, mitochondrial

Chain L

28S ribosomal protein S15, mitochondrial

Chain N

28S ribosomal protein S17, mitochondrial

Chain P

28S ribosomal protein S18c, mitochondrial

Chain T

28S ribosomal protein S25, mitochondrial

Chain U

28S ribosomal protein S26, mitochondrial