IL_6RXU_060
3D structure
- PDB id
- 6RXU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGCAAGUC*GCAGCCGCGGUAAUUCC
- Length
- 25 nucleotides
- Bulged bases
- 6RXU|1|C1|A|1140, 6RXU|1|C1|C|1156, 6RXU|1|C1|C|1157, 6RXU|1|C1|A|1163
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6RXU|1|C1|G|1136
6RXU|1|C1|G|1137
6RXU|1|C1|C|1138
6RXU|1|C1|A|1139
6RXU|1|C1|A|1140
6RXU|1|C1|G|1141
6RXU|1|C1|U|1142
6RXU|1|C1|C|1143
*
6RXU|1|C1|G|1152
6RXU|1|C1|C|1153
6RXU|1|C1|A|1154
6RXU|1|C1|G|1155
6RXU|1|C1|C|1156
6RXU|1|C1|C|1157
6RXU|1|C1|G|1158
6RXU|1|C1|C|1159
6RXU|1|C1|G|1160
6RXU|1|C1|G|1161
6RXU|1|C1|U|1162
6RXU|1|C1|A|1163
6RXU|1|C1|A|1164
6RXU|1|C1|U|1165
6RXU|1|C1|U|1166
6RXU|1|C1|C|1167
6RXU|1|C1|C|1168
Current chains
- Chain C1
- 35S rRNA
Nearby chains
- Chain CI
- Bms1
- Chain CK
- Putative U3 small nucleolar ribonucleoprotein
- Chain CL
- Putative U3 small nucleolar ribonucleoprotein protein
- Chain Cn
- 40S ribosomal protein s23-like protein
- Chain UB
- Utp2
- Chain UC
- Utp3
- Chain UK
- U3 small nucleolar RNA-associated protein 11
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