IL_6RXU_077
3D structure
- PDB id
- 6RXU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CACUG*CGUGCUGAG
- Length
- 14 nucleotides
- Bulged bases
- 6RXU|1|C1|U|2056, 6RXU|1|C1|C|2120, 6RXU|1|C1|G|2155
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6RXU|1|C1|C|2053
6RXU|1|C1|A|2054
6RXU|1|C1|C|2055
6RXU|1|C1|U|2056
6RXU|1|C1|G|2057
*
6RXU|1|C1|C|2116
6RXU|1|C1|G|2117
6RXU|1|C1|U|2118
6RXU|1|C1|G|2119
6RXU|1|C1|C|2120
6RXU|1|C1|U|2121
6RXU|1|C1|G|2155
6RXU|1|C1|A|2156
6RXU|1|C1|G|2157
Current chains
- Chain C1
- 35S rRNA
Nearby chains
- Chain CN
- Emg1
- Chain Cc
- 40S ribosomal protein s5-like protein
- Chain Cl
- Putative ribosomal protein
- Chain UB
- Utp2
- Chain UO
- Utp15
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