IL_6RXU_080
3D structure
- PDB id
- 6RXU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGUUGAUG*CUGAC
- Length
- 13 nucleotides
- Bulged bases
- 6RXU|1|C2|U|83
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6RXU|1|C2|G|80
6RXU|1|C2|G|81
6RXU|1|C2|U|82
6RXU|1|C2|U|83
6RXU|1|C2|G|84
6RXU|1|C2|A|85
6RXU|1|C2|U|86
6RXU|1|C2|G|87
*
6RXU|1|C2|C|262
6RXU|1|C2|U|263
6RXU|1|C2|G|264
6RXU|1|C2|A|265
6RXU|1|C2|C|266
Current chains
- Chain C2
- U3 snoRNA
Nearby chains
- Chain C1
- Small subunit ribosomal RNA; SSU rRNA
- Chain CD
- Nop58
- Chain CE
- Snu13
- Chain UK
- U3 small nucleolar RNA-associated protein 11
- Chain UQ
- Utp17
- Chain UR
- Utp18
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