IL_6RZZ_146

3D structure

PDB id

6RZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AGAGGGUGUAGAAUAAGUGGGAG*CGCCAGUGAAAUACCACUACCUUU

Length

47 nucleotides

Bulged bases

6RZZ|1|A|U|2455, 6RZZ|1|A|U|2464, 6RZZ|1|A|G|2466, 6RZZ|1|A|C|2496

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RZZ|1|A|A|2447
6RZZ|1|A|G|2448
6RZZ|1|A|A|2449
6RZZ|1|A|G|2450
6RZZ|1|A|G|2451
6RZZ|1|A|G|2452
6RZZ|1|A|U|2453
6RZZ|1|A|G|2454
6RZZ|1|A|U|2455
6RZZ|1|A|A|2456
6RZZ|1|A|G|2457
6RZZ|1|A|A|2458
6RZZ|1|A|A|2459
6RZZ|1|A|U|2460
6RZZ|1|A|A|2461
6RZZ|1|A|A|2462
6RZZ|1|A|G|2463
6RZZ|1|A|U|2464
6RZZ|1|A|G|2465
6RZZ|1|A|G|2466
6RZZ|1|A|G|2467
6RZZ|1|A|A|2468
6RZZ|1|A|G|2469
*
6RZZ|1|A|C|2476
6RZZ|1|A|G|2477
6RZZ|1|A|C|2478
6RZZ|1|A|C|2479
6RZZ|1|A|A|2480
6RZZ|1|A|G|2481
6RZZ|1|A|U|2482
6RZZ|1|A|G|2483
6RZZ|1|A|A|2484
6RZZ|1|A|A|2485
6RZZ|1|A|A|2486
6RZZ|1|A|U|2487
6RZZ|1|A|A|2488
6RZZ|1|A|C|2489
6RZZ|1|A|C|2490
6RZZ|1|A|A|2491
6RZZ|1|A|C|2492
6RZZ|1|A|U|2493
6RZZ|1|A|A|2494
6RZZ|1|A|C|2495
6RZZ|1|A|C|2496
6RZZ|1|A|U|2497
6RZZ|1|A|U|2498
6RZZ|1|A|U|2499

Current chains

Chain A

25S ribosomal RNA

Nearby chains

Chain p

uL1