IL_6RZZ_147

3D structure

PDB id

6RZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUGUGG*CUUUUUG

Length

13 nucleotides

Bulged bases

6RZZ|1|A|U|2860

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RZZ|1|A|U|2826
6RZZ|1|A|U|2827
6RZZ|1|A|G|2828
6RZZ|1|A|U|2829
6RZZ|1|A|G|2830
6RZZ|1|A|G|2831
*
6RZZ|1|A|C|2857
6RZZ|1|A|U|2858
6RZZ|1|A|U|2859
6RZZ|1|A|U|2860
6RZZ|1|A|U|2861
6RZZ|1|A|U|2862
6RZZ|1|A|G|2863

Current chains

Chain A

25S ribosomal RNA

Nearby chains

Chain C

60S ribosomal protein L3

Chain w

60S ribosomal export protein NMD3