IL_6RZZ_148

3D structure

PDB id

6RZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCAGUCAAG*CGACAUUGC

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6RZZ|1|A|G|2831
6RZZ|1|A|C|2832
6RZZ|1|A|A|2833
6RZZ|1|A|G|2834
6RZZ|1|A|U|2835
6RZZ|1|A|C|2836
6RZZ|1|A|A|2837
6RZZ|1|A|A|2838
6RZZ|1|A|G|2839
*
6RZZ|1|A|C|2849
6RZZ|1|A|G|2850
6RZZ|1|A|A|2851
6RZZ|1|A|C|2852
6RZZ|1|A|A|2853
6RZZ|1|A|U|2854
6RZZ|1|A|U|2855
6RZZ|1|A|G|2856
6RZZ|1|A|C|2857

Current chains

Chain A

25S ribosomal RNA

Nearby chains

Chain x

5S ribosomal RNA; 5S rRNA