Loop IL_6S0Z

3D structure

PDB id: 6S0Z (explore in PDB, NAKB, or RNA 3D Hub)
Description: Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22) in complex with erythromycin.
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å

Loop

Sequence: ACACUCUACGGAGUUACAAAGGACGACAUUAG*CGAAAAUGUUGUCUCUCUUGAGUGGAU
Length: 59 nucleotides
Bulged bases: 6S0Z|1|A|U|321, 6S0Z|1|A|G|331, 6S0Z|1|A|C|333, 6S0Z|1|A|A|391, 6S0Z|1|A|U|392, 6S0Z|1|A|U|394, 6S0Z|1|A|U|403, 6S0Z|1|A|G|405
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6S0Z|1|A|A|305
6S0Z|1|A|C|306
6S0Z|1|A|A|307
6S0Z|1|A|C|308
6S0Z|1|A|U|309
6S0Z|1|A|C|310
6S0Z|1|A|U|311
6S0Z|1|A|A|312
6S0Z|1|A|C|315
6S0Z|1|A|G|316
6S0Z|1|A|G|317
6S0Z|1|A|A|318
6S0Z|1|A|G|319
6S0Z|1|A|U|320
6S0Z|1|A|U|321
6S0Z|1|A|A|322
6S0Z|1|A|C|323
6S0Z|1|A|A|324
6S0Z|1|A|A|325
6S0Z|1|A|A|326
6S0Z|1|A|G|327
6S0Z|1|A|G|328
6S0Z|1|A|A|329
6S0Z|1|A|C|330
6S0Z|1|A|G|331
6S0Z|1|A|A|332
6S0Z|1|A|C|333
6S0Z|1|A|A|334
6S0Z|1|A|U|335
6S0Z|1|A|U|336
6S0Z|1|A|A|337
6S0Z|1|A|G|338
*
6S0Z|1|A|C|386
6S0Z|1|A|G|387
6S0Z|1|A|A|388
6S0Z|1|A|A|389
6S0Z|1|A|A|390
6S0Z|1|A|A|391
6S0Z|1|A|U|392
6S0Z|1|A|G|393
6S0Z|1|A|U|394
6S0Z|1|A|U|395
6S0Z|1|A|G|396
6S0Z|1|A|U|397
6S0Z|1|A|C|398
6S0Z|1|A|U|399
6S0Z|1|A|C|400
6S0Z|1|A|U|401
6S0Z|1|A|C|402
6S0Z|1|A|U|403
6S0Z|1|A|U|404
6S0Z|1|A|G|405
6S0Z|1|A|A|406
6S0Z|1|A|G|407
6S0Z|1|A|U|408
6S0Z|1|A|G|409
6S0Z|1|A|G|410
6S0Z|1|A|A|411
6S0Z|1|A|U|412

Current chains

Chain A: 23S ribosomal RNA

Nearby chains

Chain S: 50S ribosomal protein L24

IL_6S0Z_105