Loop IL_6S0Z

3D structure

PDB id: 6S0Z (explore in PDB, NAKB, or RNA 3D Hub)
Description: Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22) in complex with erythromycin.
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å

Loop

Sequence: CCCAGACAACUAGGAUGUUGGC*GCCAUCAUUUAAAGAGUGCGUAAUAGCUCACUAGUCGAG
Length: 61 nucleotides
Bulged bases: 6S0Z|1|A|A|1090, 6S0Z|1|A|U|1102, 6S0Z|1|A|U|1122, 6S0Z|1|A|U|1127, 6S0Z|1|A|U|1138
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6S0Z|1|A|C|1087
6S0Z|1|A|C|1088
6S0Z|1|A|C|1089
6S0Z|1|A|A|1090
6S0Z|1|A|G|1091
6S0Z|1|A|A|1092
6S0Z|1|A|C|1093
6S0Z|1|A|A|1094
6S0Z|1|A|A|1095
6S0Z|1|A|C|1096
6S0Z|1|A|U|1097
6S0Z|1|A|A|1098
6S0Z|1|A|G|1099
6S0Z|1|A|G|1100
6S0Z|1|A|A|1101
6S0Z|1|A|U|1102
6S0Z|1|A|G|1103
6S0Z|1|A|U|1104
6S0Z|1|A|U|1105
6S0Z|1|A|G|1106
6S0Z|1|A|G|1107
6S0Z|1|A|C|1108
*
6S0Z|1|A|G|1118
6S0Z|1|A|C|1119
6S0Z|1|A|C|1120
6S0Z|1|A|A|1121
6S0Z|1|A|U|1122
6S0Z|1|A|C|1123
6S0Z|1|A|A|1124
6S0Z|1|A|U|1125
6S0Z|1|A|U|1126
6S0Z|1|A|U|1127
6S0Z|1|A|A|1128
6S0Z|1|A|A|1129
6S0Z|1|A|A|1130
6S0Z|1|A|G|1131
6S0Z|1|A|A|1132
6S0Z|1|A|G|1133
6S0Z|1|A|U|1134
6S0Z|1|A|G|1135
6S0Z|1|A|C|1136
6S0Z|1|A|G|1137
6S0Z|1|A|U|1138
6S0Z|1|A|A|1139
6S0Z|1|A|A|1140
6S0Z|1|A|U|1141
6S0Z|1|A|A|1142
6S0Z|1|A|G|1143
6S0Z|1|A|C|1144
6S0Z|1|A|U|1145
6S0Z|1|A|C|1146
6S0Z|1|A|A|1147
6S0Z|1|A|C|1148
6S0Z|1|A|U|1149
6S0Z|1|A|A|1150
6S0Z|1|A|G|1151
6S0Z|1|A|U|1152
6S0Z|1|A|C|1153
6S0Z|1|A|G|1154
6S0Z|1|A|A|1155
6S0Z|1|A|G|1156

Current chains

Chain A: 23S ribosomal RNA

Nearby chains

Chain 4: 50S ribosomal protein L36
Chain G: 50S ribosomal protein L6

IL_6S0Z_107