IL_6S47_010
3D structure
- PDB id
- 6S47 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- UG*UUUGUA
- Length
- 8 nucleotides
- Bulged bases
- 6S47|1|AA|U|252
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6S47_010 not in the Motif Atlas
- Homologous match to IL_5TBW_010
- Geometric discrepancy: 0.2862
- The information below is about IL_5TBW_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37379.1
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 1
Unit IDs
6S47|1|AA|U|169
6S47|1|AA|G|170
*
6S47|1|AA|U|248
6S47|1|AA|U|249
6S47|1|AA|U|250
6S47|1|AA|G|251
6S47|1|AA|U|252
6S47|1|AA|A|253
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain AJ
- 60S ribosomal protein L8-A
- Chain AN
- 60S ribosomal protein L13-A
- Chain Aj
- 60S ribosomal protein L35-A
Coloring options: