IL_6SGA_002

3D structure

PDB id

6SGA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Body domain of the mt-SSU assemblosome from Trypanosoma brucei

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAGGAA*UUUUGAUUA

Length

15 nucleotides

Bulged bases

6SGA|1|CA|U|126

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SGA|1|CA|U|97
6SGA|1|CA|A|98
6SGA|1|CA|G|99
6SGA|1|CA|G|100
6SGA|1|CA|A|101
6SGA|1|CA|A|102
*
6SGA|1|CA|U|123
6SGA|1|CA|U|124
6SGA|1|CA|U|125
6SGA|1|CA|U|126
6SGA|1|CA|G|127
6SGA|1|CA|A|128
6SGA|1|CA|U|129
6SGA|1|CA|U|130
6SGA|1|CA|A|131

Current chains

Chain CA

9S rRNA

Nearby chains

Chain CO

uS15m

Chain CQ

uS17m

Chain F3

mt-SAF3

Chain F7

mt-SAF7 (KRIPP10)

Chain FO

mt-SAF22 (KRIPP17)

Chain UF

UNK-F