IL_6SGA_005

3D structure

PDB id

6SGA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Body domain of the mt-SSU assemblosome from Trypanosoma brucei

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUUUUAAACA*UAUAUG

Length

16 nucleotides

Bulged bases

6SGA|1|CA|U|339

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SGA|1|CA|U|336
6SGA|1|CA|U|337
6SGA|1|CA|U|338
6SGA|1|CA|U|339
6SGA|1|CA|U|340
6SGA|1|CA|A|341
6SGA|1|CA|A|342
6SGA|1|CA|A|343
6SGA|1|CA|C|344
6SGA|1|CA|A|345
*
6SGA|1|CA|U|354
6SGA|1|CA|A|355
6SGA|1|CA|U|356
6SGA|1|CA|A|357
6SGA|1|CA|U|358
6SGA|1|CA|G|359

Current chains

Chain CA

9S rRNA

Nearby chains

Chain CK

uS11m

Chain CO

uS15m

Chain F7

mt-SAF7 (KRIPP10)

Chain FY

mt-SAF28

Chain Fd

mt-SAF33

Chain UY

UNK-I