IL_6SGB_005

3D structure

PDB id

6SGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

mt-SSU assemblosome of Trypanosoma brucei

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUUUUAAACA*UAUAUG

Length

16 nucleotides

Bulged bases

6SGB|1|CA|U|339

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SGB|1|CA|U|336
6SGB|1|CA|U|337
6SGB|1|CA|U|338
6SGB|1|CA|U|339
6SGB|1|CA|U|340
6SGB|1|CA|A|341
6SGB|1|CA|A|342
6SGB|1|CA|A|343
6SGB|1|CA|C|344
6SGB|1|CA|A|345
*
6SGB|1|CA|U|354
6SGB|1|CA|A|355
6SGB|1|CA|U|356
6SGB|1|CA|A|357
6SGB|1|CA|U|358
6SGB|1|CA|G|359

Current chains

Chain CA

9S rRNA

Nearby chains

Chain CK

uS11m

Chain CO

uS15m

Chain F7

mt-SAF7 (KRIPP10)

Chain FY

mt-SAF28

Chain Fd

mt-SAF33

Chain UY

UNK-Y