IL_6SKG_028

3D structure

PDB id

6SKG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GGGAGAG*UGGAAC

Length

13 nucleotides

Bulged bases

6SKG|1|Aa|A|611

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SKG|1|Aa|G|606
6SKG|1|Aa|G|607
6SKG|1|Aa|G|608
6SKG|1|Aa|A|609
6SKG|1|Aa|G|610
6SKG|1|Aa|A|611
6SKG|1|Aa|G|612
*
6SKG|1|Aa|U|686
6SKG|1|Aa|G|687
6SKG|1|Aa|G|688
6SKG|1|Aa|A|689
6SKG|1|Aa|A|690
6SKG|1|Aa|C|691

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ad

30S ribosomal protein S3Ae

Chain Aq

30S ribosomal protein S15

Chain Ax

30S ribosomal protein S27e