IL_6SKG_097
3D structure
- PDB id
- 6SKG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- UUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6SKG_097 not in the Motif Atlas
- Homologous match to IL_4V9F_020
- Geometric discrepancy: 0.1545
- The information below is about IL_4V9F_020
- Detailed Annotation
- AAA cross-strand stack
- Broad Annotation
- AAA cross-strand stack
- Motif group
- IL_66798.3
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
6SKG|1|BA|U|697
6SKG|1|BA|U|698
6SKG|1|BA|A|699
6SKG|1|BA|A|700
6SKG|1|BA|G|701
*
6SKG|1|BA|C|713
6SKG|1|BA|G|714
6SKG|1|BA|A|715
6SKG|1|BA|A|716
6SKG|1|BA|G|717
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BE
- 50S ribosomal protein L4
- Chain Bq
- Unknown ribosomal protein
Coloring options: