IL_6SKG_104
3D structure
- PDB id
- 6SKG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 6SKG|1|BA|G|904, 6SKG|1|BA|A|916, 6SKG|1|BA|A|917
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6SKG_104 not in the Motif Atlas
- Geometric match to IL_4V9F_030
- Geometric discrepancy: 0.0751
- The information below is about IL_4V9F_030
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_57881.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
6SKG|1|BA|G|903
6SKG|1|BA|G|904
6SKG|1|BA|G|905
*
6SKG|1|BA|C|915
6SKG|1|BA|A|916
6SKG|1|BA|A|917
6SKG|1|BA|U|918
6SKG|1|BA|C|919
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BC
- 50S ribosomal protein L2
- Chain BP
- 50S ribosomal protein L15e
- Chain BV
- 50S ribosomal protein L22
- Chain Bh
- 50S ribosomal protein L37e
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