IL_6SKG_120

3D structure

PDB id

6SKG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CUUAGACAGCGG*CCCGUCGAG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SKG|1|BA|C|1175
6SKG|1|BA|U|1176
6SKG|1|BA|U|1177
6SKG|1|BA|A|1178
6SKG|1|BA|G|1179
6SKG|1|BA|A|1180
6SKG|1|BA|C|1181
6SKG|1|BA|A|1182
6SKG|1|BA|G|1183
6SKG|1|BA|C|1184
6SKG|1|BA|G|1185
6SKG|1|BA|G|1186
*
6SKG|1|BA|C|1236
6SKG|1|BA|C|1237
6SKG|1|BA|C|1238
6SKG|1|BA|G|1239
6SKG|1|BA|U|1240
6SKG|1|BA|C|1241
6SKG|1|BA|G|1242
6SKG|1|BA|A|1243
6SKG|1|BA|G|1244

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BG

50S ribosomal protein L6

Chain BT

50S ribosomal protein L18Ae