IL_6SPB_036
3D structure
- PDB id
- 6SPB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GGUAAACG*CGGAAGAUGUAACGGGGC
- Length
- 26 nucleotides
- Bulged bases
- 6SPB|1|A|A|1117, 6SPB|1|A|U|1120
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SPB|1|A|G|1014
6SPB|1|A|G|1015
6SPB|1|A|U|1016
6SPB|1|A|A|1017
6SPB|1|A|A|1018
6SPB|1|A|A|1019
6SPB|1|A|C|1020
6SPB|1|A|G|1021
*
6SPB|1|A|C|1113
6SPB|1|A|G|1114
6SPB|1|A|G|1115
6SPB|1|A|A|1116
6SPB|1|A|A|1117
6SPB|1|A|G|1118
6SPB|1|A|A|1119
6SPB|1|A|U|1120
6SPB|1|A|G|1121
6SPB|1|A|U|1122
6SPB|1|A|A|1123
6SPB|1|A|A|1124
6SPB|1|A|C|1125
6SPB|1|A|G|1126
6SPB|1|A|G|1127
6SPB|1|A|G|1128
6SPB|1|A|G|1129
6SPB|1|A|C|1130
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 6
- 50S ribosomal protein L36
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain D
- 50S ribosomal protein L3
- Chain J
- 50S ribosomal protein L13
- Chain M
- 50S ribosomal protein L16
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