IL_6SPB_039
3D structure
- PDB id
- 6SPB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GCUUAGACAGCUAG*CUAGUCGAGUC
- Length
- 25 nucleotides
- Bulged bases
- 6SPB|1|A|A|1036, 6SPB|1|A|A|1044, 6SPB|1|A|U|1095
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SPB|1|A|G|1032
6SPB|1|A|C|1033
6SPB|1|A|U|1034
6SPB|1|A|U|1035
6SPB|1|A|A|1036
6SPB|1|A|G|1037
6SPB|1|A|A|1038
6SPB|1|A|C|1039
6SPB|1|A|A|1040
6SPB|1|A|G|1041
6SPB|1|A|C|1042
6SPB|1|A|U|1043
6SPB|1|A|A|1044
6SPB|1|A|G|1045
*
6SPB|1|A|C|1094
6SPB|1|A|U|1095
6SPB|1|A|A|1096
6SPB|1|A|G|1097
6SPB|1|A|U|1098
6SPB|1|A|C|1099
6SPB|1|A|G|1100
6SPB|1|A|A|1101
6SPB|1|A|G|1102
6SPB|1|A|U|1103
6SPB|1|A|C|1104
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain G
- 50S ribosomal protein L6
- Chain I
- 50S ribosomal protein L11
Coloring options: