IL_6SPB_049

3D structure

PDB id

6SPB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

ACUGC*GCUUCAGGU

Length

14 nucleotides

Bulged bases

6SPB|1|A|U|1573, 6SPB|1|A|C|1575

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPB|1|A|A|1400
6SPB|1|A|C|1401
6SPB|1|A|U|1402
6SPB|1|A|G|1403
6SPB|1|A|C|1404
*
6SPB|1|A|G|1571
6SPB|1|A|C|1572
6SPB|1|A|U|1573
6SPB|1|A|U|1574
6SPB|1|A|C|1575
6SPB|1|A|A|1576
6SPB|1|A|G|1577
6SPB|1|A|G|1578
6SPB|1|A|U|1579

Current chains

Chain A

23S ribosomal RNA

Nearby chains