IL_6SPB_081

3D structure

PDB id

6SPB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GCUUUGAAGC*GUGGAGC

Length

17 nucleotides

Bulged bases

6SPB|1|A|C|2116, 6SPB|1|A|U|2117

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPB|1|A|G|2115
6SPB|1|A|C|2116
6SPB|1|A|U|2117
6SPB|1|A|U|2118
6SPB|1|A|U|2119
6SPB|1|A|G|2120
6SPB|1|A|A|2121
6SPB|1|A|A|2122
6SPB|1|A|G|2123
6SPB|1|A|C|2124
*
6SPB|1|A|G|2141
6SPB|1|A|U|2142
6SPB|1|A|G|2143
6SPB|1|A|G|2144
6SPB|1|A|A|2145
6SPB|1|A|G|2146
6SPB|1|A|C|2147

Current chains

Chain A

23S ribosomal RNA

Nearby chains