IL_6SPB_097

3D structure

PDB id

6SPB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

CUCCUAGUAC*GGACCGGAG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPB|1|A|C|2636
6SPB|1|A|U|2637
6SPB|1|A|C|2638
6SPB|1|A|C|2639
6SPB|1|A|U|2640
6SPB|1|A|A|2641
6SPB|1|A|G|2642
6SPB|1|A|U|2643
6SPB|1|A|A|2644
6SPB|1|A|C|2645
*
6SPB|1|A|G|2650
6SPB|1|A|G|2651
6SPB|1|A|A|2652
6SPB|1|A|C|2653
6SPB|1|A|C|2654
6SPB|1|A|G|2655
6SPB|1|A|G|2656
6SPB|1|A|A|2657
6SPB|1|A|G|2658

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain G

50S ribosomal protein L6

Chain K

50S ribosomal protein L14