IL_6SPC_029

3D structure

PDB id

6SPC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

UG*CACCAGUGGCGAAGGCGA

Length

20 nucleotides

Bulged bases

6SPC|1|a|U|717

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPC|1|a|U|666
6SPC|1|a|G|667
*
6SPC|1|a|C|711
6SPC|1|a|A|712
6SPC|1|a|C|713
6SPC|1|a|C|714
6SPC|1|a|A|715
6SPC|1|a|G|716
6SPC|1|a|U|717
6SPC|1|a|G|718
6SPC|1|a|G|719
6SPC|1|a|C|720
6SPC|1|a|G|721
6SPC|1|a|A|722
6SPC|1|a|A|723
6SPC|1|a|G|724
6SPC|1|a|G|725
6SPC|1|a|C|726
6SPC|1|a|G|727
6SPC|1|a|A|728

Current chains

Chain a

16S rRNA

Nearby chains

Chain f

30S ribosomal protein S6

Chain k

30S ribosomal protein S11

Chain o

30S ribosomal protein S15

Chain r

30S ribosomal protein S18

Chain u

30S ribosomal protein S21