IL_6SPC_054

3D structure

PDB id

6SPC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

CGCA*UUCCCG

Length

10 nucleotides

Bulged bases

6SPC|1|a|C|928

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPC|1|a|C|926
6SPC|1|a|G|927
6SPC|1|a|C|928
6SPC|1|a|A|929
*
6SPC|1|a|U|1374
6SPC|1|a|U|1375
6SPC|1|a|C|1376
6SPC|1|a|C|1377
6SPC|1|a|C|1378
6SPC|1|a|G|1379

Current chains

Chain a

16S rRNA

Nearby chains

Chain g

30S ribosomal protein S7

Chain i

30S ribosomal protein S9