IL_6SPC_058
3D structure
- PDB id
- 6SPC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.95 Å
Loop
- Sequence
- GAACUUUCCAGAGAUGGAUUGGUGC*GAAC
- Length
- 29 nucleotides
- Bulged bases
- 6SPC|1|a|A|1008, 6SPC|1|a|G|1009, 6SPC|1|a|A|1010
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SPC|1|a|G|997
6SPC|1|a|A|998
6SPC|1|a|A|999
6SPC|1|a|C|1000
6SPC|1|a|U|1001
6SPC|1|a|U|1002
6SPC|1|a|U|1003
6SPC|1|a|C|1004
6SPC|1|a|C|1005
6SPC|1|a|A|1006
6SPC|1|a|G|1007
6SPC|1|a|A|1008
6SPC|1|a|G|1009
6SPC|1|a|A|1010
6SPC|1|a|U|1011
6SPC|1|a|G|1012
6SPC|1|a|G|1013
6SPC|1|a|A|1014
6SPC|1|a|U|1015
6SPC|1|a|U|1016
6SPC|1|a|G|1017
6SPC|1|a|G|1018
6SPC|1|a|U|1019
6SPC|1|a|G|1020
6SPC|1|a|C|1021
*
6SPC|1|a|G|1028
6SPC|1|a|A|1029
6SPC|1|a|A|1030
6SPC|1|a|C|1031
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain n
- 30S ribosomal protein S14
- Chain s
- 30S ribosomal protein S19
Coloring options: