IL_6SPD_061

3D structure

PDB id

6SPD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 50s ribosome from a clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CUAG*CUCUGG

Length

10 nucleotides

Bulged bases

6SPD|1|A|A|1704

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPD|1|A|C|1702
6SPD|1|A|U|1703
6SPD|1|A|A|1704
6SPD|1|A|G|1707
*
6SPD|1|A|C|1728
6SPD|1|A|U|1729
6SPD|1|A|C|1730
6SPD|1|A|U|1731
6SPD|1|A|G|1732
6SPD|1|A|G|1733

Current chains

Chain A

23S ribosomal RNA

Nearby chains