IL_6SPE_016

3D structure

PDB id

6SPE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 30s ribosome from a clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GACAAUGG*CUGAUC

Length

14 nucleotides

Bulged bases

6SPE|1|a|G|382

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPE|1|a|G|364
6SPE|1|a|A|365
6SPE|1|a|C|366
6SPE|1|a|A|367
6SPE|1|a|A|368
6SPE|1|a|U|369
6SPE|1|a|G|370
6SPE|1|a|G|371
*
6SPE|1|a|C|380
6SPE|1|a|U|381
6SPE|1|a|G|382
6SPE|1|a|A|383
6SPE|1|a|U|384
6SPE|1|a|C|385

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain p

30S ribosomal protein S16