IL_6SWA_012

3D structure

PDB id

6SWA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGGCG*CCGGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SWA|1|q|C|172
6SWA|1|q|G|173
6SWA|1|q|G|174
6SWA|1|q|C|175
6SWA|1|q|G|176
*
6SWA|1|q|C|253
6SWA|1|q|C|254
6SWA|1|q|G|255
6SWA|1|q|G|256
6SWA|1|q|G|257

Current chains

Chain q

28S ribosomal RNA (3612-MER)

Nearby chains

Chain K

60S ribosomal protein L13

Chain f

60S ribosomal protein L35