IL_6SWA_037

3D structure

PDB id

6SWA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUCC*GGGCCCG

Length

11 nucleotides

Bulged bases

6SWA|1|q|G|1196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SWA|1|q|C|1065
6SWA|1|q|U|1066
6SWA|1|q|C|1067
6SWA|1|q|C|1068
*
6SWA|1|q|G|1194
6SWA|1|q|G|1195
6SWA|1|q|G|1196
6SWA|1|q|C|1197
6SWA|1|q|C|1198
6SWA|1|q|C|1199
6SWA|1|q|G|1200

Current chains

Chain q

28S ribosomal RNA (3612-MER)

Nearby chains

Chain F

60S ribosomal protein L7