IL_6SWA_148

3D structure

PDB id

6SWA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAACGG*CCUCGC

Length

13 nucleotides

Bulged bases

6SWA|1|q|C|4884, 6SWA|1|q|G|4885

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SWA|1|q|G|4849
6SWA|1|q|A|4850
6SWA|1|q|A|4851
6SWA|1|q|A|4852
6SWA|1|q|C|4853
6SWA|1|q|G|4854
6SWA|1|q|G|4855
*
6SWA|1|q|C|4881
6SWA|1|q|C|4882
6SWA|1|q|U|4883
6SWA|1|q|C|4884
6SWA|1|q|G|4885
6SWA|1|q|C|4886

Current chains

Chain q

28S ribosomal RNA (3612-MER)

Nearby chains

Chain L

60S ribosomal protein L14

Chain N

60S ribosomal protein L13a