IL_6SWA_154

3D structure

PDB id

6SWA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SWA|1|q|U|4961
6SWA|1|q|C|4962
6SWA|1|q|G|4963
6SWA|1|q|U|4964
6SWA|1|q|A|4965
6SWA|1|q|C|4966
6SWA|1|q|G|4967
*
6SWA|1|q|U|4997
6SWA|1|q|U|4998
6SWA|1|q|G|4999
6SWA|1|q|A|5000
6SWA|1|q|A|5001
6SWA|1|q|A|5002

Current chains

Chain q

28S ribosomal RNA (3612-MER)

Nearby chains

Chain B

60S ribosomal protein L3

Chain U

60S ribosomal protein L24

Chain b

60S ribosomal protein L31