IL_6SWA_173
3D structure
- PDB id
- 6SWA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GCUGGGAAGGCC*GCAGCAGCACUCGC
- Length
- 26 nucleotides
- Bulged bases
- 6SWA|1|q|U|719, 6SWA|1|q|G|720, 6SWA|1|q|A|919, 6SWA|1|q|C|921, 6SWA|1|q|A|922, 6SWA|1|q|C|923, 6SWA|1|q|C|925
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SWA|1|q|G|717
6SWA|1|q|C|718
6SWA|1|q|U|719
6SWA|1|q|G|720
6SWA|1|q|G|721
6SWA|1|q|G|722
6SWA|1|q|A|723
6SWA|1|q|A|724
6SWA|1|q|G|725
6SWA|1|q|G|726
6SWA|1|q|C|727
6SWA|1|q|C|728
*
6SWA|1|q|G|914
6SWA|1|q|C|915
6SWA|1|q|A|916
6SWA|1|q|G|917
6SWA|1|q|C|918
6SWA|1|q|A|919
6SWA|1|q|G|920
6SWA|1|q|C|921
6SWA|1|q|A|922
6SWA|1|q|C|923
6SWA|1|q|U|924
6SWA|1|q|C|925
6SWA|1|q|G|926
6SWA|1|q|C|927
Current chains
- Chain q
- 28S ribosomal RNA (3612-MER)
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain F
- 60S ribosomal protein L7
- Chain L
- 60S ribosomal protein L14
- Chain Q
- 60S ribosomal protein L18a
Coloring options: