IL_6SWA_190

3D structure

PDB id

6SWA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUGU*GCCAAG

Length

10 nucleotides

Bulged bases

6SWA|1|q|A|4450

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SWA|1|q|U|4430
6SWA|1|q|U|4431
6SWA|1|q|G|4432
6SWA|1|q|U|4433
*
6SWA|1|q|G|4446
6SWA|1|q|C|4447
6SWA|1|q|C|4448
6SWA|1|q|A|4449
6SWA|1|q|A|4450
6SWA|1|q|G|4451

Current chains

Chain q

28S ribosomal RNA (3612-MER)

Nearby chains

Chain H

60S ribosomal protein L9

Chain N

60S ribosomal protein L13a

Chain k

Ubiquitin-60S ribosomal protein L40